Analysis of 3’-UTR polymorphisms of the LEP gene in adolescents
https://doi.org/10.29413/ABS.2026-11.2.4
Abstract
Background. Leptin, a hormone secreted by adipose tissue, is considered as an important regulator of metabolism and energy homeostasis. Some leptin gene polymorphisms may be risk factors for obesity and other metabolic disorders, and there are ethnic differences in the prevalence and impact of these polymorphisms on anthropometric parameters.
The aim. To sequence fragment 128255194-128257652 (2458 bp) of the LEP gene (GRCh38/hg38, NM_000230.3) for identifying polymorphisms associated with biochemical and anthropometric parameters in adolescents with different weight status.
Materials and Methods. The study included adolescents aged 11 to 17 years with different weight status. Amplification conditions were selected, and sequencing of fragment 128255194-128257652 of the LEP gene was performed.
Results. Sequencing of the 128255194-128257652 region of the LEP gene revealed four polymorphisms: rs10954174, rs41434248, rs41457646, and rs11761556. When comparing the groups, statistically significant differences in the frequency distribution of the rs11761556 alleles were revealed among Russians and Buryats with normal body weight. The frequency of the alternative allele G rs10954174 was 1 in all groups; the alternative allele A rs41434248 was detected only in the main group of Russians with a frequency of 0.036; the frequency of the allele A rs41457646 in the control group of Russians and Buryats was 0.083 and 0.25, in the main group of Russians and Buryats – 0.107 and 0.091, respectively; the frequency of the allele A rs11761556 in the control group of Russians and Buryats was 0.583 and 0.958, in the main group of Russians and Buryats – 0.643 and 0.727, respectively. All the identified frequencies are consistent with world data, according to NCBI.
Conclusions. We found no significant associations between the identified polymorphisms and biochemical and anthropometric parameters in adolescents with different weight statuses. For rs11761556, statistically significant differences in the allele frequency distribution were demonstrated between Russians and Buryats with normal body weight.
About the Authors
N. V. NemchinovaRussian Federation
Nadezhda V. Nemchinova –Research Assistant at the Laboratory of Personalized Medicine, Scientific Сentre for Family Health and Human Reproduction Problems.
Timiryazev Str., 16, Irkutsk 664003
T. A. Bairova
Russian Federation
Tatyana A. Bairova – Dr. Sc. (Med.), professor, head of the Laboratory of Personalized Medicine, Scientific Centre for Family Health and Human Reproduction Problems.
Timiryazev Str., 16, Irkutsk 664003
O. A. Ershova
Russian Federation
Oksana A. Ershova – Cand. Sc. (Biol.), Research Officer at the Laboratory of Personalized Medicine, Scientific Centre for Family Health and Human Reproduction Problems.
Timiryazev Str., 16, Irkutsk 664003
A. Yu. Sambyalova
Russian Federation
Alexandra Yu. Sambyalova – Junior Research Officer at the Laboratory of Personalized Medicine, Scientific Centre for Family Health and Human Reproduction Problems.
Timiryazev Str., 16, Irkutsk 664003
E. S. Klimenko
Russian Federation
Elizaveta S. Klimenko – Junior Research Officer at the Laboratory for Microbiome and Microecology, Institute of Epidemiology and Microbiology, Scientific Centre for Family Health and Human Reproduction Problems.
Timiryazev Str., 16, Irkutsk 664003
E. V. Belyaeva
Russian Federation
Elena V. Belyaeva – Cand. Sc. (Biol.), Research Officer at the Laboratory of Personalized Medicine, Scientific Centre for Family Health and Human Reproduction Problems.
Timiryazev Str., 16, Irkutsk 664003
L. V. Rychkova
Russian Federation
Lyubov V. Rychkova – Dr. Sc. (Med.), Professor, Corresponding Member of the RAS, Director of the Scientific Centre for Family Health and Human Reproduction Problems.
Timiryazev Str., 16, Irkutsk 664003
References
1. Perakakis N, Farr OM, Mantzoros CS. Leptin in Leanness and Obesity: JACC State-of-the-Art Review. J Am Coll Cardiol. 2021; 77(6): 745-760. doi: 10.1016/j.jacc.2020.11.069
2. Chaulin AM, Grigoreva YuV. On the biological role of leptin. Scientific Review. Biological science. 2021; 1: 32-38. (In Russ.). doi: 10.17513/srbs.1222
3. Pankov YuA. Mutations in the genes encoding for leptin and its mediators: induction of obesity with various concomitant pathological conditions. Problems of Endocrinology. 2013; 59(2): 49-59. (In Russ.). doi: 10.14341/probl201359249-59
4. Bairqdar A, Ivanoshchuk D, Shakhtshneider E. Functionally Significant Variants in Genes Associated with Abdominal Obesity: A Review. J Pers Med. 2023; 13(3): 460. doi: 10.3390/jpm13030460
5. Rychkova L, Bairova T, Ievleva K, Balzhieva V, Rashidova M, Kolesnikova L. LEP rs2167270 and plasma leptin level in adolescents with overweight and obesity. Eur JPrev Cardiol. 2018; 25(2): 18-54.
6. Bairova TA, Ershova OA, Sambyalova AYu, Belyaeva EV, Sinkov VV, Rychkova LV. Sequencing of a fragment of the leptin gene in adolescents with different weight status. Acta Biomedica Scientifica. 2023; 8(4): 92-100. (In Russ.). doi: 10.29413/ABS.2023-8.4.10
7. Ershova OA, Bairova TA, Sambyalova AYu, Belyaeva EV, Sinkov VV, Balzhieva VV, et al. Association of polymorphic variants of the leptin gene with anthropometric and biochemical parameters in adolescents with different weight status. Acta Biomedica Scientifica. 2024; 9(4): 49-60. (In Russ.). doi: 10.29413/ABS.2024-9.4.6
8. Belyaeva EV, Bairova TA, Ershova OA, Sambyalova AYu, Sinkov VV, Balzhieva VV, et al. Targeted Sequencing of the LEP Gene in Various Ethnic Groups of Obese Adolescents. Russian Journal of Genetics. 2024; 60(11): 1531–1537. doi: 10.1134/S1022795424701084
9. Primer-BLAST. URL: https://blast.ncbi.nlm.nih.gov/Blast.cgi [date of access: May 28, 2025].
10. Primer Design and Search Tool. URL: https://bisearch.pbrg.hu/ [date of access: May 28, 2025].
11. Sõber S, Org E, Kepp K, Juhanson P, Eyheramendy S, Gieger C, et al. Targeting 160 candidate genes for blood pressure regulation with a genome-wide genotyping array. PLoS One. 2009; 4(6): e6034. doi: 10.1371/journal.pone.0006034
12. Lombard Z, Crowther NJ, van der Merwe L, Pitamber P, Norris SA, Ramsay M. Appetite regulation genes are associated with body mass index in black South African adolescents: a genetic association study. BMJ Open. 2012; 2(3): e000873. doi: 10.1136/bmjopen-2012-000873
13. Lin R, Ju H, Yuan Z, Zhang C, Zeng L, Sun Y, et al. Effects of maternal and fetal LEP common variants on maternal glycemic traits in pregnancy. Sci Rep. 2017; 7(1): 17710. doi: 10.1038/s41598-017-18117-z
14. Mansell T, Ponsonby AL, Collier F, Burgner D, Vuillermin P, Lange K, et al. Genetic variation, intrauterine growth, and adverse pregnancy conditions predict leptin gene DNA methylation in blood at birth and 12 months of age. Int J Obes (Lond). 2020; 44(1): 45-56. doi: 10.1038/s41366-019-0472-3
15. González-Rodríguez L, González LM, García-Herráiz A, Mota-Zamorano S, Flores I, Gervasini G. Association of genetic variation in the leptin-melanocortin system with drive for thinness in patients with eating disorders: A pilot study. Gene. 2025; 949: 149364. doi: 10.1016/j.gene.2025.149364
16. Li HM, Wang LJ, Tang F, Pan HF, Zhang TP. Zhang Association of leptin and leptin receptor genes variants and pulmonary tuberculosis susceptibility, clinical manifestations in a Chinese population. Microb Pathog. 2022; 165: 105499. doi: 10.1016/j.micpath.2022.105499
17. Musafer KN, Huyop FZ, Ewadh MJ, Supriyanto E, Al-Thuwaini TM, Al-Shuhaib MBS. The single nucleotide polymorphisms rs11761556 and rs12706832 of the leptin gene are associated with type 2 diabetes mellitus in the Iraqi population. Arch Biol Sci. 2021; 73(1): 93-101. doi: ABS210129005M
18. Bouafi H, Krami AM, Morjane I, Slaoui K, Harmak H, Charoute H, et al. Genetic association of LEP gene polymorphisms with obesity in Moroccan individuals: case-control study and updated meta-analysis. Biochem Genet. 2023; 61(5): 1758-1774. doi: 10.1007/s10528-023-10342-8
Review
For citations:
Nemchinova N.V., Bairova T.A., Ershova O.A., Sambyalova A.Yu., Klimenko E.S., Belyaeva E.V., Rychkova L.V. Analysis of 3’-UTR polymorphisms of the LEP gene in adolescents. Acta Biomedica Scientifica. 2026;11(2):35-43. (In Russ.) https://doi.org/10.29413/ABS.2026-11.2.4
JATS XML

.png)






























