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Associations of genes of DNA repair systems with Parkinson’s disease

https://doi.org/10.29413/ABS.2022-7.6.2

Abstract

Background. Approximately 5–10 % of cases of Parkinson’s disease (PD) are monogenic, in other cases the pathology has a multifactorial etiology. One of recognized pathogenetic pathways of PD is mitochondrial dysfunction, in particular the accumulation of damage in mitochondrial DNA. Hence, the genes of DNA repair proteins are promising candidate genes for multifactorial forms of PD.
The aim. To study the involvement of genes of DNA repair proteins in the development of Parkinson’s disease.
Materials and methods. The associative analysis was carried out while comparing a group of patients with PD (n = 133) with a Tomsk population sample (n = 344). SNaPshot analysis was used to study 8 SNPs in genes of DNA repair proteins (rs560191 (TP53BP1); rs1805800 and rs709816 (NBN); rs473297 (MRE11A); rs1189037 and rs1801516 (ATM); rs1799977 (MLH1); rs1805321 (PMS2)).
Results. Common alleles and homozygous rs1801516 genotypes in the ATM gene predispose the development of PD (odds ratio (OR) – 3.27 (p = 0.000004) and OR = 3.46 (p = 0.00008) for risk alleles and genotype respectively) and rs1799977 in the MLH1 gene (OR = 1.88 (p = 0.0004) and OR = 2.42 (p = 0.00007) respectively); heterozygotes have a protective effect (OR = 0.33 (p = 0.0007) and OR = 0.46 (p = 0.0007) for ATM and MLH1, respectively). The rare rs1805800 allele in the NBN gene (OR = 1.62 (p = 0.019)) and a homozygous genotype for it (OR = 2.28 (p = 0.016)) also predispose to PD. Associations with PD of the ATM, MLH1, NBN genes were revealed for the first time.
Conclusion. Mitochondrial dysfunction is one of the key factors in the pathogenesis of PD, while at least two of the three protein products of associated genes are involved in the development of mitochondrial dysfunction. Accordingly, it can be assumed that associated genes are involved in the pathogenesis of PD precisely through mitochondrial dysfunction.

About the Authors

N. P. Babushkina
Research Institute of Medical Genetics, Tomsk National Research Medical Center, Russian Academy of Sciences 
Russian Federation

Nadezhda P.  Babushkina  – Cand. Sc. (Biol.), Research Officer at the Laboratory of Population Genetics

 Ushaika embankment 10, Tomsk 634050, Russian Federation 



M. A. Nikitina
Siberian State Medical University
Russian Federation

Maria A. Nikitina– Cand. Sc. (Med.), Associate Professor at the Department of Neurology and Neurosurgery 

Moskovsky tract 2, Tomsk 634050, Russian Federation 



E. Yu. Bragina
Research Institute of Medical Genetics, Tomsk National Research Medical Center, Russian Academy of Sciences
Russian Federation

Elena Yu. Bragina – Cand. Sc. (Biol.), Senior Research Officer at the Laboratory of Population Genetics 

 Ushaika embankment 10, Tomsk 634050, Russian Federation 



V. M. Alifirova
Siberian State Medical University
Russian Federation

Valentina M. Alifirova– Dr. Sc. (Med.), Professor, Head of the Department of Neurology and Neurosurgery 

Moskovsky tract 2, Tomsk 634050, Russian Federation 



A. E. Postrigan
Research Institute of Medical Genetics, Tomsk National Research Medical Center, Russian Academy of Sciences
Russian Federation

Anna E. Postrigan – Junior Research Officer at the Laboratory of Orphan Diseases Genomics 

 Ushaika embankment 10, Tomsk 634050, Russian Federation 



Ye. A. Deviatkina
Siberian State Medical University
Russian Federation

Yekaterina A. Deviatkina – Student 

Moskovsky tract 2, Tomsk 634050, Russian Federation 



D. E. Gomboeva
Research Institute of Medical Genetics, Tomsk National Research Medical Center, Russian Academy of Sciences
Russian Federation

Densema E. Gomboeva – Clinical Resident 

 Ushaika embankment 10, Tomsk 634050, Russian Federation 



M. S. Nazarenko
Research Institute of Medical Genetics, Tomsk National Research Medical Center, Russian Academy of Sciences; Siberian State Medical University
Russian Federation

Maria S. Nazarenko – Dr. Sc. (Med.), Leading Research Officer at the Laboratory of Population Genetics; Professor at the Department of Medical Genetics 

Ushaika embankment 10, Tomsk 634050, Russian Federation 

Moskovsky tract 2, Tomsk 634050, Russian Federation 



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For citations:


Babushkina N.P., Nikitina M.A., Bragina E.Yu., Alifirova V.M., Postrigan A.E., Deviatkina Ye.A., Gomboeva D.E., Nazarenko M.S. Associations of genes of DNA repair systems with Parkinson’s disease. Acta Biomedica Scientifica. 2022;7(6):12-21. (In Russ.) https://doi.org/10.29413/ABS.2022-7.6.2

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