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Interim results of selective screening using whole exome sequencing in newborns

https://doi.org/10.29413/ABS.2025-10.1.7

Abstract

Background. Evaluation of hereditary diseases is a difficult task due to the large number of nosologic forms, rare occurrence of each disease, which can lead to a long diagnostic search for the patient. Different methods of molecular genetics, including full-exome sequencing, are actively introducing into the complex of examination of newborns with general pathology and lead to better diagnosis and prognosis for children and their families.

The aim of the study. To estimate the frequency of occurrence of genetic disorders in newborns with somatic and surgical pathology during selective screening using whole exome sequencing.

Materials and methods. Within the  framework of  the  regional pilot project on selective exome screening of newborn children, which is carried out on the basis of the National Medical Research Center for Obstetrics, Gynecology and Perinatology named after Academician V.I. Kulakov, we estimated the results of genetic evaluation of 80 newborns who were treated in the neonatal departments of the Ivano-Matreninskaya City Children’s Clinical Hospital from February to October 2024.

Results. Eighty children were examined. Genetic findings of varying significance were detected in  31.2  % of  the  examined children. Pathogenic and likely pathogenic gene variants were detected in 16.2 % of cases, and chromosomal aberrations in  2.5  % of  patients. Genetic findings of  varying significance were found in  52  % of those examined for nervous system damage and in 18 % of patients with congenital malformations. By the time of description, the genetic diagnosis was confirmed in 16.2 % of patients with genetic findings. The diagnosis was based on the complete correspondence of the child’s existing phenotype with the identified gene variant.

Conclusions. The results of this study indicate a possible high incidence of exome abnormalities in neonatal pathology, as well as the high efficiency of whole exome sequencing in their diagnosis.

About the Authors

G. P. Bogonosova
Scientific Centre for Family Health and Human Reproduction Problems; Ivano-Matreninskaya City Children’s Clinical Hospital
Russian Federation

Galina P. Bogonosova – Postgraduate at the Laboratory of Pediatrics, Neonatologist, Timiryazeva str. 16, Irkutsk 664003;

Neonatologist, Sovetskaya str. 57, Irkutsk 664009



O. V. Bugun
Scientific Centre for Family Health and Human Reproduction Problems
Russian Federation

Olga V. Bugun – Dr. Sc. (Med.), Deputy Director for Clinical Work, 

Timiryazeva str. 16, Irkutsk 664003



S. V. Ionushene
Scientific Centre for Family Health and Human Reproduction Problems; M.S. Malinovsky Irkutsk City Perinatal Centre
Russian Federation

Svetlana  V. Ionushene – Cand.  Sc. (Med.), Anesthesiologist-Reanimatologist, Timiryazeva str. 16, Irkutsk 664003;

Anesthesiologist-Reanimatologist, Surikova str. 16, Irkutsk 664025



T. A. Astakhova
Scientific Centre for Family Health and Human Reproduction Problems
Russian Federation

Tatyana A. Astakhova – Cand. Sc. (Med.), Senior Research Officer at the Laboratory of Pediatrics and Cardiovascular Pathology,

Timiryazeva str. 16, Irkutsk 664003



I. M. Golobkova
Irkutsk State Medical University
Russian Federation

Irina M. Golobkova – Clinical Resident in Genetics at the Department of Nervous Diseases, 

Krasnogo Vosstaniya str. 1, Irkutsk 664003



A. A. Dokshukina
National Medical Research Center for Obstetrics, Gynecology and Perinatology named after Academician V.I. Kulakov
Russian Federation

Аlina А. Dokshukina – Geneticist at the Institute of Reproductive Genetics, Neonatologist, Research Officer at the Pediatric Outpatient Department, Institute of Neonatology and Pediatrics, 

Oparina str. 4, Moscow 117997



Je. Shubina
National Medical Research Center for Obstetrics, Gynecology and Perinatology named after Academician V.I. Kulakov
Russian Federation

Jekaterina Shubina – Cand. Sc. (Biol.), Head of the Laboratory for Genomic Data Analysis, Institute of Reproductive Genetics, 

Oparina str. 4, Moscow 117997



T. A. Bairova
Scientific Centre for Family Health and Human Reproduction Problems
Russian Federation

Tatyana A. Bairova – Dr. Sc. (Med.), Head of the Laboratory of Personalized Medicine,

Timiryazeva str. 16, Irkutsk 664003



D. N. Degtyarev
National Medical Research Center for Obstetrics, Gynecology and Perinatology named after Academician V.I. Kulakov
Russian Federation

Dmitriy N. Degtyarev – Dr. Sc. (Med.), Professor, Deputy Director for Science,

Oparina str. 4, Moscow 117997



D. Yu. Trofimov
National Medical Research Center for Obstetrics, Gynecology and Perinatology named after Academician V.I. Kulakov
Russian Federation

Dmitry Yu. Trofimov – Dr. Sc. (Biol.), Professor of the RAS, Corresponding Member of the RAS, Director of the Institute of Reproductive Genetics,

Oparina str. 4, Moscow 117997



L. V. Rychkova
Scientific Centre for Family Health and Human Reproduction Problems
Russian Federation

Lyubov V. Rychkova – Dr. Sc. (Med.), Professor, Corresponding Member of the RAS, Director,

Timiryazeva str. 16, Irkutsk 664003



N. N. Martynovich
Research Clinical Institute of Childhood of the Ministry of Healthcare of the Moscow Region
Russian Federation

Natalya N. Martynovich – Dr. Sc. (Med), Professor, Head of the Department of Pediatric Centre for Orphan Diseases,

Bolshaya Serpukhovskaya str. 62, Moscow 115093



O. G. Ivanova
M.S. Malinovsky Irkutsk City Perinatal Centre
Russian Federation

Olga G. Ivanova – Anesthesiologist-Reanimatologist, 

Surikova str. 16, Irkutsk 664025



M. I. Kononenko
Ivano-Matreninskaya City Children’s Clinical Hospital
Russian Federation

Marina I. Kononenko – Neonatologist, 

Sovetskaya str. 57, Irkutsk 664009



V. O. Kolodina
Ivano-Matreninskaya City Children’s Clinical Hospital
Russian Federation

Viktoria O. Kolodina – Neonatologist,

Sovetskaya str. 57, Irkutsk 664009



N. N. Kuznetsova
Ivano-Matreninskaya City Children’s Clinical Hospital
Russian Federation

Nina N. Kuznetsova – Neonatologist, 

Sovetskaya str. 57, Irkutsk 664009



M. R. Akhmedzyanova
Scientific Centre for Family Health and Human Reproduction Problems
Russian Federation

Margarita R. Akhmedzyanova – Junior Research Officer,

Timiryazeva str. 16, Irkutsk 664003



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Review

For citations:


Bogonosova G.P., Bugun O.V., Ionushene S.V., Astakhova T.A., Golobkova I.M., Dokshukina A.A., Shubina J., Bairova T.A., Degtyarev D.N., Trofimov D.Yu., Rychkova L.V., Martynovich N.N., Ivanova O.G., Kononenko M.I., Kolodina V.O., Kuznetsova N.N., Akhmedzyanova M.R. Interim results of selective screening using whole exome sequencing in newborns. Acta Biomedica Scientifica. 2025;10(1):69-76. (In Russ.) https://doi.org/10.29413/ABS.2025-10.1.7

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