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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">actabiomedica</journal-id><journal-title-group><journal-title xml:lang="ru">Acta Biomedica Scientifica</journal-title><trans-title-group xml:lang="en"><trans-title>Acta Biomedica Scientifica</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">2541-9420</issn><issn pub-type="epub">2587-9596</issn><publisher><publisher-name>Scientific Centre for Family Health and Human Reproduction Problems</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.29413/ABS.2023-8.6.8</article-id><article-id custom-type="elpub" pub-id-type="custom">actabiomedica-4495</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>МИКРОБИОЛОГИЯ И ВИРУСОЛОГИЯ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>MICROBIOLOGY AND VIRUSOLOGY</subject></subj-group></article-categories><title-group><article-title>Генетическая гетерогенность популяции Rickettsia helvetica</article-title><trans-title-group xml:lang="en"><trans-title>Genetic heterogeneity of Rickettsia helvetica population</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-5930-5306</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Рар</surname><given-names>В. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Rar</surname><given-names>V. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Рар Вера Александровна – кандидат биологических наук, старший научный сотрудник лаборатории молекулярной микробиологии </p><p>630090, г. Новосибирск, просп. Лаврентьева, 8</p></bio><bio xml:lang="en"><p>Vera A. Rar – Cand. Sc. (Biol.), Senior Research Officer at the Laboratory of Molecular Microbiology </p><p>Lavrentyeva Ave. 8, Novosibirsk 630090</p></bio><email xlink:type="simple">rarv@niboch.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-5604-1846</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Иголкина</surname><given-names>Я. П.</given-names></name><name name-style="western" xml:lang="en"><surname>Igolkina</surname><given-names>Ya. P.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Иголкина Яна Петровна – кандидат биологических наук, младший научный сотрудник молекулярной микробиологии </p><p>630090, г. Новосибирск, просп. Лаврентьева, 8</p></bio><bio xml:lang="en"><p>Yana P. Igolkina – Cand. Sc. (Biol.), Junior Research Officer at the Laboratory of Molecular Microbiology </p><p>Lavrentyeva Ave. 8, Novosibirsk 630090</p></bio><email xlink:type="simple">igolkina@inbox.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-9088-3668</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Якименко</surname><given-names>В. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Yakimenko</surname><given-names>V. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Якименко Валерий Викторович – доктор биологических наук, главный научный сотрудник, заведующий лабораторией арбовирусных инфекций отдела природно-очаговых вирусных инфекций </p><p>644080, г. Омск, просп. Мира, 7</p></bio><bio xml:lang="en"><p>Valeriy V. Yakimenko – Dr. Sc. (Biol.), Chief Research Officer, Head of the Laboratory of Arbovirus Infections of the Department of Natural Focal Viral Infections </p><p>Mira Ave. 7, Omsk 644080</p></bio><email xlink:type="simple">yakimenko_vv@oniipi.org</email><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-5613-5447</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Тикунов</surname><given-names>А. Ю.</given-names></name><name name-style="western" xml:lang="en"><surname>Tikunov</surname><given-names>A. Yu.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Тикунов Артем Юрьевич – кандидат биологических наук, старший научный сотрудник, заведующий лабораторией противомикробных препаратов </p><p>630090, г. Новосибирск, просп. Лаврентьева, 8</p></bio><bio xml:lang="en"><p>Artem Yu. Tikunov – Cand. Sc. (Biol.), Senior Research Officer, Head of the Laboratory of Antimicrobials </p><p>Lavrentyeva Ave. 8, Novosibirsk 630090</p></bio><email xlink:type="simple">arttik@ngs.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-3918-7832</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Никитин</surname><given-names>А. Я.</given-names></name><name name-style="western" xml:lang="en"><surname>Nikitin</surname><given-names>A. Ya.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Никитин Алексей Яковлевич – доктор биологических наук, ведущий научный сотрудник зоолого-паразитологического отдела </p><p>664047, г. Иркутск, ул. Трилиссера, 78</p></bio><bio xml:lang="en"><p>Aleksey Yu. Nikitin – Dr. Sc. (Biol.), Leading Research Officer at the Zoological and Parasitological Department </p><p>Trilissera str. 78, Irkutsk 664047</p></bio><email xlink:type="simple">nikitin_irk@mail.ru</email><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0009-0005-7077-1809</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Епихина</surname><given-names>Т. И.</given-names></name><name name-style="western" xml:lang="en"><surname>Epikhina</surname><given-names>T. I.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Епихина Тамара Ивановна – ведущий инженер лаборатории молекулярной микробиологии </p><p>630090, г. Новосибирск, просп. Лаврентьева, 8</p></bio><bio xml:lang="en"><p>Tamara I. Epikhina – Lead Engineer at the Laboratory of Molecular Microbiology </p><p>Lavrentyeva Ave. 8, Novosibirsk 630090</p></bio><email xlink:type="simple">tiepikhina@gmail.com</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-1687-8278</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Тикунова</surname><given-names>Н. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Tikunova</surname><given-names>N. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Тикунова Нина Викторовна – доктор биологических наук, главный научный сотрудник, заведующий лабораторией молекулярной микробиологии </p><p>630090, г. Новосибирск, просп. Лаврентьева, 8</p></bio><bio xml:lang="en"><p>Nina V. Tikunova – Dr. Sc. (Biol.), Chief Research Officer, Head of the Laboratory of Molecular Microbiology </p><p>Lavrentyeva Ave. 8, Novosibirsk 630090</p></bio><email xlink:type="simple">tikunova@niboch.nsc.ru</email><xref ref-type="aff" rid="aff-1"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru"><institution>ФГБУН Институт химической биологии и фундаментальной медицины СО РАН</institution></aff><aff xml:lang="en"><institution>Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences</institution></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru"><institution>ФБУН «Омский научно-исследовательский институт природно-очаговых инфекций»</institution></aff><aff xml:lang="en"><institution>Omsk Research Institute of Natural Focal Infections</institution></aff></aff-alternatives><aff-alternatives id="aff-3"><aff xml:lang="ru"><institution>ФКУЗ Иркутский научно-исследовательский противочумный институт Сибири и Дальнего Востока Федеральной службы по надзору в сфере защиты прав потребителей и благополучия человека</institution></aff><aff xml:lang="en"><institution>Irkutsk Antiplague Research Institute of Siberia and Far East of Rospotrebnadzor</institution></aff></aff-alternatives><pub-date pub-type="collection"><year>2023</year></pub-date><pub-date pub-type="epub"><day>14</day><month>01</month><year>2024</year></pub-date><volume>8</volume><issue>6</issue><fpage>91</fpage><lpage>104</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Рар В.А., Иголкина Я.П., Якименко В.В., Тикунов А.Ю., Никитин А.Я., Епихина Т.И., Тикунова Н.В., 2024</copyright-statement><copyright-year>2024</copyright-year><copyright-holder xml:lang="ru">Рар В.А., Иголкина Я.П., Якименко В.В., Тикунов А.Ю., Никитин А.Я., Епихина Т.И., Тикунова Н.В.</copyright-holder><copyright-holder xml:lang="en">Rar V.A., Igolkina Y.P., Yakimenko V.V., Tikunov A.Y., Nikitin A.Y., Epikhina T.I., Tikunova N.V.</copyright-holder><license xml:lang="ru" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>Данная работа распространяется под лицензией Creative Commons Attribution 4.0.</license-p></license><license xml:lang="en" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://www.actabiomedica.ru/jour/article/view/4495">https://www.actabiomedica.ru/jour/article/view/4495</self-uri><abstract><sec><title>Обоснование</title><p>Обоснование. Генетическая вариабельность Rickettsia helvetica недостаточно изучена.</p></sec><sec><title>Цель исследования</title><p>Цель исследования. Изучить встречаемость и генетическую вариабельность R. helvetica в Ixodes spp., собранных в Сибири и на Дальнем Востоке.</p></sec><sec><title>Методы</title><p>Методы. На наличие риккетсий проанализированы клещи, снятые с грызунов в Омской области (n = 280) и собранные на флаг на островах Путятина и Русский в Приморском крае (n = 482). Для всех образцов риккетсий секвенированы фрагмента гена gltA, а для ряда образцов R. helvetica дополнительно секвенированы фрагменты  16S rRNA, ompA, ompB, sca4, htrA и groEL генов и 23S–5S межгенного спейсера.</p></sec><sec><title>Результаты</title><p>Результаты. Всего было выявлено четыре вида риккетсий. Из них R. helvetica обнаружена в 72,2 % Ixodes apronophorus и 18,8 % Ixodes trianguliceps из Омской области и в единичных Ixodes persulcatus из Омской области и с острова Путятина. Это первое выявление риккетсий в I. apronophorus. На основании проведённого филогенетического анализа последовательности R. helvetica из данной работы и из базы данных GenBank отнесены к четырём генетическим линиям. Линия  I включает европейские изоляты из Ixodes ricinus, изоляты из I. persulcatus из Западной Сибири и некоторые последовательности из I. apronophorus. Все последовательности R. helvetica из I. trianguliceps из Омской области и из I. persulcatus из Республики Коми, а также последовательность из I. apronophorus отнесены к линии II. Большинство последовательностей из I. apronophorus образуют линию III, а все последовательности R. helvetica из I. persulcatus с Дальнего Востока – линию IV.</p></sec><sec><title>Заключение</title><p>Заключение. Впервые показана генетическая гетерогенность популяции R.  helvetica. Известные изоляты R.  helvetica надёжно отнесены к четырём генетическим линиям, однако ассоциация различных линий с определённым видом клеща или с определённой территорией наблюдается не во всех случаях.</p></sec></abstract><trans-abstract xml:lang="en"><sec><title>Background</title><p>Background. To date, the genetic variability of Rickettsia helvetica has not been sufficiently studied.</p></sec><sec><title>The aim</title><p>The aim. To study the prevalence and genetic variability of R. helvetica in Ixodes spp. collected in Western Siberia and the Russian Far East.</p></sec><sec><title>Materials and methods</title><p>Materials and methods. Ixodes  spp. collected from rodents in the Omsk province, Western Siberia (n = 280) and collected by flagging on Putyatin and Russky Islands in Primorsky Krai, Russian Far East (n = 482) were analyzed for the presence of Rickettsia spp. All positive samples were genotyped for the gltA gene fragment. For a number of R. helvetica samples, fragments of the 16S rRNA, ompA, ompB, sca4, htrA, and groEL genes and 23S–5S intergenic spacer were additionally sequenced.</p></sec><sec><title>Results</title><p>Results. Four Rickettsia species (R. helvetica, “Candidatus Rickettsia tarasevichiae”, “Candidatus Rickettsia uralica”, and “Candidatus Rickettsia mendelii”) were found. Of them, R. helvetica was identified in 72.2 % of Ixodes apronophorus and 18.8 % of  Ixodes trianguliceps from the Omsk province and in single Ixodes persulcatus from the Omsk province and Putyatin Island. This is the first finding of Rickettsia spp. in I. apronophorus. All known R. helvetica sequences from this study and the GenBank database belonged to four well supported monopheletic groups forming genetic lineages I–IV. Lineage I included European isolates from Ixodes ricinus, Western Siberian isolates from I. persulcatus, and some sequences from I. apronophorus. All R. helvetica sequences from I. trianguliceps from the Omsk province and I. persulcatus from  the  Komi Republic and one sequence from I.  apronophorus were assigned to  lineage  II. Most sequences from I.  apronophorus formed lineage  III; all known R. helvetica sequences from I. persulcatus from the Far East formed genetic lineage IV.</p></sec><sec><title>Conclusion</title><p>Conclusion. The genetic heterogeneity of R. helvetica population was first demonstrated. Known isolates of R. helvetica are reliably assigned to four genetic lineages, but not in all cases the association of different lineages with a specific tick species or specific territory was observed.</p></sec></trans-abstract><kwd-group xml:lang="ru"><kwd>Ixodes apronophorus</kwd><kwd>Ixodes persulcatus</kwd><kwd>Ixodes trianguliceps</kwd><kwd>Rickettsia helvetica</kwd><kwd>область симпатрии</kwd><kwd>генетические линии</kwd><kwd>филогенетический анализ</kwd></kwd-group><kwd-group xml:lang="en"><kwd>Ixodes apronophorus</kwd><kwd>Ixodes persulcatus</kwd><kwd>Ixodes trianguliceps</kwd><kwd>Rickettsia helvetica</kwd><kwd>sympatric areas</kwd><kwd>genetic lineages</kwd><kwd>phylogenetic analysis</kwd></kwd-group><funding-group><funding-statement xml:lang="ru">Работа выполнена при финансовой поддержке проекта Государственного задания ФГБУН Институт химической биологии и фундаментальной медицины СО РАН (№ 121031300043-8).</funding-statement></funding-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Fournier PE, Grunnenberger F, Jaulhac B, Gastinger G, Raoult D. 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